Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning

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Standard

Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning. / Hanif, Umaer; Kiaer, Eva Kirkegaard; Capasso, Robson; Liu, Stanley Y.; Mignot, Emmanuel J. M.; Sorensen, Helge B. D.; Jennum, Poul.

I: Sleep Medicine, Bind 102, 2023, s. 19-29.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

Hanif, U, Kiaer, EK, Capasso, R, Liu, SY, Mignot, EJM, Sorensen, HBD & Jennum, P 2023, 'Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning', Sleep Medicine, bind 102, s. 19-29. https://doi.org/10.1016/j.sleep.2022.12.015

APA

Hanif, U., Kiaer, E. K., Capasso, R., Liu, S. Y., Mignot, E. J. M., Sorensen, H. B. D., & Jennum, P. (2023). Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning. Sleep Medicine, 102, 19-29. https://doi.org/10.1016/j.sleep.2022.12.015

Vancouver

Hanif U, Kiaer EK, Capasso R, Liu SY, Mignot EJM, Sorensen HBD o.a. Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning. Sleep Medicine. 2023;102:19-29. https://doi.org/10.1016/j.sleep.2022.12.015

Author

Hanif, Umaer ; Kiaer, Eva Kirkegaard ; Capasso, Robson ; Liu, Stanley Y. ; Mignot, Emmanuel J. M. ; Sorensen, Helge B. D. ; Jennum, Poul. / Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning. I: Sleep Medicine. 2023 ; Bind 102. s. 19-29.

Bibtex

@article{f8f0504266be4eef8c4ee570256d3b52,
title = "Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning",
abstract = "Background: Treatment of obstructive sleep apnea is crucial for long term health and reduced economic burden. For those considered for surgery, drug-induced sleep endoscopy (DISE) is a method to characterize location and pattern of sleep-related upper airway collapse. According to the VOTE classification system, four upper airway sites of collapse are characterized: velum (V), oropharynx (O), tongue (T), and epiglottis (E). The degree of obstruction per site is classified as 0 (no obstruction), 1 (partial obstruction), or 2 (complete obstruction). Here we propose a deep learning approach for automatic scoring of VOTE obstruction degrees from DISE videos. Methods: We included 281 DISE videos with varying durations (6 s–16 min) from two sleep clinics: Copenhagen University Hospital and Stanford University Hospital. Examinations were split into 5-s clips, each receiving annotations of 0, 1, 2, or X (site not visible) for each site (V, O, T, and E), which was used to train a deep learning model. Predicted VOTE obstruction degrees per examination was obtained by taking the highest predicted degree per site across 5-s clips, which was evaluated against VOTE degrees annotated by surgeons. Results: Mean F1 score of 70% was obtained across all DISE examinations (V: 85%, O: 72%, T: 57%, E: 65%). For each site, sensitivity was highest for degree 2 and lowest for degree 0. No bias in performance was observed between videos from different clinicians/hospitals. Conclusions: This study demonstrates that automating scoring of DISE examinations show high validity and feasibility in degree of upper airway collapse.",
keywords = "Deep learning, Drug-induced sleep endoscopy, Obstructive sleep apnea, vote classification",
author = "Umaer Hanif and Kiaer, {Eva Kirkegaard} and Robson Capasso and Liu, {Stanley Y.} and Mignot, {Emmanuel J. M.} and Sorensen, {Helge B. D.} and Poul Jennum",
note = "Publisher Copyright: {\textcopyright} 2022 The Authors",
year = "2023",
doi = "10.1016/j.sleep.2022.12.015",
language = "English",
volume = "102",
pages = "19--29",
journal = "Sleep Medicine",
issn = "1389-9457",
publisher = "Elsevier",

}

RIS

TY - JOUR

T1 - Automatic scoring of drug-induced sleep endoscopy for obstructive sleep apnea using deep learning

AU - Hanif, Umaer

AU - Kiaer, Eva Kirkegaard

AU - Capasso, Robson

AU - Liu, Stanley Y.

AU - Mignot, Emmanuel J. M.

AU - Sorensen, Helge B. D.

AU - Jennum, Poul

N1 - Publisher Copyright: © 2022 The Authors

PY - 2023

Y1 - 2023

N2 - Background: Treatment of obstructive sleep apnea is crucial for long term health and reduced economic burden. For those considered for surgery, drug-induced sleep endoscopy (DISE) is a method to characterize location and pattern of sleep-related upper airway collapse. According to the VOTE classification system, four upper airway sites of collapse are characterized: velum (V), oropharynx (O), tongue (T), and epiglottis (E). The degree of obstruction per site is classified as 0 (no obstruction), 1 (partial obstruction), or 2 (complete obstruction). Here we propose a deep learning approach for automatic scoring of VOTE obstruction degrees from DISE videos. Methods: We included 281 DISE videos with varying durations (6 s–16 min) from two sleep clinics: Copenhagen University Hospital and Stanford University Hospital. Examinations were split into 5-s clips, each receiving annotations of 0, 1, 2, or X (site not visible) for each site (V, O, T, and E), which was used to train a deep learning model. Predicted VOTE obstruction degrees per examination was obtained by taking the highest predicted degree per site across 5-s clips, which was evaluated against VOTE degrees annotated by surgeons. Results: Mean F1 score of 70% was obtained across all DISE examinations (V: 85%, O: 72%, T: 57%, E: 65%). For each site, sensitivity was highest for degree 2 and lowest for degree 0. No bias in performance was observed between videos from different clinicians/hospitals. Conclusions: This study demonstrates that automating scoring of DISE examinations show high validity and feasibility in degree of upper airway collapse.

AB - Background: Treatment of obstructive sleep apnea is crucial for long term health and reduced economic burden. For those considered for surgery, drug-induced sleep endoscopy (DISE) is a method to characterize location and pattern of sleep-related upper airway collapse. According to the VOTE classification system, four upper airway sites of collapse are characterized: velum (V), oropharynx (O), tongue (T), and epiglottis (E). The degree of obstruction per site is classified as 0 (no obstruction), 1 (partial obstruction), or 2 (complete obstruction). Here we propose a deep learning approach for automatic scoring of VOTE obstruction degrees from DISE videos. Methods: We included 281 DISE videos with varying durations (6 s–16 min) from two sleep clinics: Copenhagen University Hospital and Stanford University Hospital. Examinations were split into 5-s clips, each receiving annotations of 0, 1, 2, or X (site not visible) for each site (V, O, T, and E), which was used to train a deep learning model. Predicted VOTE obstruction degrees per examination was obtained by taking the highest predicted degree per site across 5-s clips, which was evaluated against VOTE degrees annotated by surgeons. Results: Mean F1 score of 70% was obtained across all DISE examinations (V: 85%, O: 72%, T: 57%, E: 65%). For each site, sensitivity was highest for degree 2 and lowest for degree 0. No bias in performance was observed between videos from different clinicians/hospitals. Conclusions: This study demonstrates that automating scoring of DISE examinations show high validity and feasibility in degree of upper airway collapse.

KW - Deep learning

KW - Drug-induced sleep endoscopy

KW - Obstructive sleep apnea

KW - vote classification

U2 - 10.1016/j.sleep.2022.12.015

DO - 10.1016/j.sleep.2022.12.015

M3 - Journal article

C2 - 36587544

AN - SCOPUS:85144947815

VL - 102

SP - 19

EP - 29

JO - Sleep Medicine

JF - Sleep Medicine

SN - 1389-9457

ER -

ID: 333631599